Add optional BSSN kernel profiling switches
This commit is contained in:
@@ -59,6 +59,14 @@ using namespace std;
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#define BSSN_FINE_TIMING_TOPN 8
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#endif
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#ifndef BSSN_KERNEL_FINE_TIMING
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#define BSSN_KERNEL_FINE_TIMING 0
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#endif
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#ifndef BSSN_ENABLE_STDIN_ABORT_POLL
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#define BSSN_ENABLE_STDIN_ABORT_POLL 0
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#endif
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#if BSSN_FINE_TIMING
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namespace step_timing
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{
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@@ -198,6 +206,74 @@ namespace step_timing
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#define STEP_TIMER_ADD(bucket_name, var_name)
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#endif
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#if BSSN_KERNEL_FINE_TIMING
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namespace rhs_kernel_timing_report
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{
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void report(int myrank, int nprocs, int step_index, double step_wall_seconds)
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{
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const int bucket_count = f_bssn_rhs_kernel_timing_bucket_count();
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const double *local_bucket_seconds = f_bssn_rhs_kernel_timing_local_seconds();
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if (bucket_count <= 0 || !local_bucket_seconds)
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return;
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double *max_bucket_seconds = new double[bucket_count];
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double *avg_bucket_seconds = new double[bucket_count];
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int *order = new int[bucket_count];
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MPI_Reduce((void *)local_bucket_seconds, max_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
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MPI_Reduce((void *)local_bucket_seconds, avg_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
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if (myrank == 0)
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{
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double kernel_total = 0.0;
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for (int i = 0; i < bucket_count; ++i)
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{
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avg_bucket_seconds[i] /= Mymax(1, nprocs);
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order[i] = i;
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kernel_total += max_bucket_seconds[i];
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}
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for (int i = 0; i < bucket_count - 1; ++i)
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for (int j = i + 1; j < bucket_count; ++j)
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if (max_bucket_seconds[order[j]] > max_bucket_seconds[order[i]])
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{
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int tmp = order[i];
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order[i] = order[j];
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order[j] = tmp;
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}
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ios::fmtflags old_flags = cout.flags();
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streamsize old_precision = cout.precision();
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const double kernel_frac = (step_wall_seconds > 0.0) ? (100.0 * kernel_total / step_wall_seconds) : 0.0;
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cout << " RHS kernel split (max-rank accumulated over step " << step_index << "): total "
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<< setprecision(6) << kernel_total << " s (" << setprecision(4)
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<< kernel_frac << "% of coarse step)" << endl;
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const int topn = Mymin(BSSN_FINE_TIMING_TOPN, bucket_count);
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for (int i = 0; i < topn; ++i)
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{
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const int ib = order[i];
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const double frac = (kernel_total > 0.0) ? (100.0 * max_bucket_seconds[ib] / kernel_total) : 0.0;
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cout << " "
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<< setw(20) << left << f_bssn_rhs_kernel_timing_label(ib)
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<< " = " << setw(10) << right << setprecision(6) << max_bucket_seconds[ib]
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<< " s (" << setw(6) << setprecision(4) << frac << "% of kernel)" << endl;
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}
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cout << endl;
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cout.flags(old_flags);
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cout.precision(old_precision);
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}
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delete[] max_bucket_seconds;
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delete[] avg_bucket_seconds;
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delete[] order;
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}
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}
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#endif
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//================================================================================================
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// define bssn_class
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@@ -2325,7 +2401,12 @@ void bssn_class::Evolve(int Steps)
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{
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#if BSSN_FINE_TIMING
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step_timing::reset();
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STEP_TIMER_DECL(step_wall_start);
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#endif
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#if BSSN_KERNEL_FINE_TIMING
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f_bssn_rhs_kernel_timing_reset();
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#endif
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#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
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const double step_wall_start = MPI_Wtime();
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#endif
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// special for large mass ratio consideration
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// if(fabs(Porg0[0][0]-Porg0[1][0])+fabs(Porg0[0][1]-Porg0[1][1])+fabs(Porg0[0][2]-Porg0[1][2])<1e-6)
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@@ -2449,10 +2530,13 @@ void bssn_class::Evolve(int Steps)
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<< endl;
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}
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cout << endl;
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#if BSSN_ENABLE_STDIN_ABORT_POLL
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cout << " If you think the physical evolution time is enough for this simulation, please input 'stop' in the terminal to stop the MPI processes in the next evolution step ! " << endl;
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#endif
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// cout << endl;
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}
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#if BSSN_ENABLE_STDIN_ABORT_POLL
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////////////////////////////////////////////////////////////
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// If an "abort" command is detected on stdin, terminate MPI processes
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////////////////////////////////////////////////////////////
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@@ -2480,6 +2564,7 @@ void bssn_class::Evolve(int Steps)
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}
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////////////////////////////////////////////////////////////
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#endif
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// When LastCheck >= CheckTime, perform runtime checks and output status data
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if (LastCheck >= CheckTime)
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@@ -2496,9 +2581,16 @@ void bssn_class::Evolve(int Steps)
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STEP_TIMER_ADD(TB_CHECKPOINT, timer_checkpoint);
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}
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#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
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const double step_wall_seconds = MPI_Wtime() - step_wall_start;
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#endif
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#if BSSN_FINE_TIMING
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if (ncount % BSSN_FINE_TIMING_EVERY == 0)
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step_timing::report(myrank, nprocs, TimingMonitor, ncount, PhysTime, MPI_Wtime() - step_wall_start);
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step_timing::report(myrank, nprocs, TimingMonitor, ncount, PhysTime, step_wall_seconds);
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#endif
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#if BSSN_KERNEL_FINE_TIMING
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if (ncount % BSSN_FINE_TIMING_EVERY == 0)
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rhs_kernel_timing_report::report(myrank, nprocs, ncount, step_wall_seconds);
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#endif
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}
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/*
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@@ -32,6 +32,19 @@
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#define f_compute_rhs_Z4c_ss compute_rhs_z4c_ss_
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#define f_compute_constraint_fr compute_constraint_fr_
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#endif
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#ifdef __cplusplus
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extern "C"
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{
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#endif
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void f_bssn_rhs_kernel_timing_reset();
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int f_bssn_rhs_kernel_timing_bucket_count();
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const double *f_bssn_rhs_kernel_timing_local_seconds();
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const char *f_bssn_rhs_kernel_timing_label(int);
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#ifdef __cplusplus
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}
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#endif
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extern "C"
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{
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int f_compute_rhs_bssn(int *, double &, double *, double *, double *, // ex,T,X,Y,Z
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@@ -2,12 +2,88 @@
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#include "bssn_rhs.h"
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#include "share_func.h"
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#include "tool.h"
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#include <time.h>
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// 0-based i,j,k
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// #define IDX_F(i,j,k,nx,ny) ((i) + (j)*(nx) + (k)*(nx)*(ny))
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// ex(1)=nx, ex(2)=ny, ex(3)=nz
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// 用法:a[ IDX_F(i,j,k,nx,ny) ]
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#ifndef BSSN_KERNEL_FINE_TIMING
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#define BSSN_KERNEL_FINE_TIMING 0
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#endif
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#if BSSN_KERNEL_FINE_TIMING
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namespace rhs_kernel_timing
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{
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enum Bucket
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{
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KB_SETUP_DERIVS = 0,
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KB_GEOM_GAMMA,
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KB_RICCI_METRIC,
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KB_CHI_LAPSE,
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KB_AIJ_TRK_GAUGE,
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KB_KO_CONSTRAINT,
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KB_COUNT
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};
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static double local_bucket_seconds[KB_COUNT];
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static const char *bucket_labels[KB_COUNT] =
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{
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"setup_derivs",
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"geom_gamma",
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"ricci_metric",
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"chi_lapse",
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"aij_trk_gauge",
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"ko_constraint"
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};
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static inline double now_seconds()
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{
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struct timespec ts;
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clock_gettime(CLOCK_MONOTONIC, &ts);
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return double(ts.tv_sec) + 1.0e-9 * double(ts.tv_nsec);
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}
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}
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extern "C" void f_bssn_rhs_kernel_timing_reset()
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{
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for (int i = 0; i < rhs_kernel_timing::KB_COUNT; ++i)
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rhs_kernel_timing::local_bucket_seconds[i] = 0.0;
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}
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extern "C" int f_bssn_rhs_kernel_timing_bucket_count()
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{
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return rhs_kernel_timing::KB_COUNT;
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}
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extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds()
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{
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return rhs_kernel_timing::local_bucket_seconds;
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}
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extern "C" const char *f_bssn_rhs_kernel_timing_label(int bucket_index)
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{
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if (bucket_index < 0 || bucket_index >= rhs_kernel_timing::KB_COUNT)
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return "unknown";
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return rhs_kernel_timing::bucket_labels[bucket_index];
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}
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#define RHS_KERNEL_TIMER_DECL(var_name) const double var_name = rhs_kernel_timing::now_seconds()
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#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name) \
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rhs_kernel_timing::local_bucket_seconds[int(rhs_kernel_timing::bucket_name)] += \
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rhs_kernel_timing::now_seconds() - (var_name)
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#else
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extern "C" void f_bssn_rhs_kernel_timing_reset() {}
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extern "C" int f_bssn_rhs_kernel_timing_bucket_count() { return 0; }
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extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds() { return 0; }
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extern "C" const char *f_bssn_rhs_kernel_timing_label(int) { return "disabled"; }
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#define RHS_KERNEL_TIMER_DECL(var_name)
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#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name)
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#endif
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// C function that calculates the right-hand side for BSSN equations
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int f_compute_rhs_bssn(int *ex, double &T,
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double *X, double *Y, double *Z,
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@@ -102,6 +178,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
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dY = Y[1] - Y[0];
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dZ = Z[1] - Z[0];
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RHS_KERNEL_TIMER_DECL(timer_setup_derivs);
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// 1ms //
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for(int i=0;i<all;i+=1){
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alpn1[i] = Lap[i] + 1.0;
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@@ -141,6 +218,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
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(dxx[i] + ONE) * betaxz[i] + gxy[i] * betayz[i] + gyz[i] * betayx[i]
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+ (dzz[i] + ONE) * betazx[i] - gxz[i] * betayy[i];
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}
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RHS_KERNEL_TIMER_ADD(KB_SETUP_DERIVS, timer_setup_derivs);
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RHS_KERNEL_TIMER_DECL(timer_geom_gamma);
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// Fused: inverse metric + Gamma constraint + Christoffel (3 loops -> 1)
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for(int i=0;i<all;i+=1){
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double det = (dxx[i] + ONE) * (dyy[i] + ONE) * (dzz[i] + ONE) + gxy[i] * gyz[i] * gxz[i] + gxz[i] * gxy[i] * gyz[i] -
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@@ -312,6 +391,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
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+ TWO * ( Gamzxy[i]*axy + Gamzxz[i]*axz + Gamzyz[i]*ayz )
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);
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}
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RHS_KERNEL_TIMER_ADD(KB_GEOM_GAMMA, timer_geom_gamma);
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RHS_KERNEL_TIMER_DECL(timer_ricci_metric);
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// 22.3ms //
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fdderivs(ex,betax,gxxx,gxyx,gxzx,gyyx,gyzx,gzzx,
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X,Y,Z,ANTI,SYM, SYM ,Symmetry,Lev);
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@@ -682,7 +763,9 @@ int f_compute_rhs_bssn(int *ex, double &T,
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+ Gamxyz[i] * gzzx[i] + Gamyyz[i] * gzzy[i] + Gamzyz[i] * gzzz[i]
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);
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}
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RHS_KERNEL_TIMER_ADD(KB_RICCI_METRIC, timer_ricci_metric);
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RHS_KERNEL_TIMER_DECL(timer_chi_lapse);
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// 22.3ms //
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fdderivs(ex,chi,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
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@@ -761,6 +844,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
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trK_rhs[i] = gupxx[i] * fxx[i] + gupyy[i] * fyy[i] + gupzz[i] * fzz[i]
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+ TWO * ( gupxy[i] * fxy[i] + gupxz[i] * fxz[i] + gupyz[i] * fyz[i] );
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}
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RHS_KERNEL_TIMER_ADD(KB_CHI_LAPSE, timer_chi_lapse);
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RHS_KERNEL_TIMER_DECL(timer_aij_trk_gauge);
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// 2.5ms //
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for (int i=0;i<all;i+=1) {
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const double divb = betaxx[i] + betayy[i] + betazz[i];
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@@ -1061,6 +1146,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
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dtSfz_rhs[i] = Gamz_rhs[i] - reta[i] * dtSfz[i];
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#endif
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}
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RHS_KERNEL_TIMER_ADD(KB_AIJ_TRK_GAUGE, timer_aij_trk_gauge);
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RHS_KERNEL_TIMER_DECL(timer_ko_constraint);
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// advection + KO dissipation with shared symmetry buffer
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lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
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lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
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@@ -1192,6 +1279,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
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movz_Res[i] = movz_Res[i] - F2o3*Kz[i] - F8*PI*Sz[i];
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}
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}
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RHS_KERNEL_TIMER_ADD(KB_KO_CONSTRAINT, timer_ko_constraint);
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@@ -29,12 +29,16 @@
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#define REGLEV 0
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#define BSSN_FINE_TIMING 1
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#define BSSN_FINE_TIMING 0
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#define BSSN_FINE_TIMING_EVERY 1
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#define BSSN_FINE_TIMING_TOPN 8
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#define BSSN_KERNEL_FINE_TIMING 0
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#define BSSN_ENABLE_STDIN_ABORT_POLL 0
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//#define USE_GPU
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//#define CHECKDETAIL
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@@ -103,6 +107,12 @@
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// define BSSN_FINE_TIMING_TOPN
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// number of hottest timing buckets shown in stdout
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//
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// define BSSN_KERNEL_FINE_TIMING
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// enable split timing inside compute_rhs_bssn
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//
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// define BSSN_ENABLE_STDIN_ABORT_POLL
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// poll stdin and broadcast abort flag every coarse step
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//
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// define USE_GPU
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// use gpu or not
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//
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@@ -157,4 +167,3 @@
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#define TINY 1e-10
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#endif /* MICRODEF_H */
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@@ -144,11 +144,15 @@ def generate_macrodef_h():
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print( "#define REGLEV 0", file=file1 )
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print( file=file1 )
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# Define fine-grained timestep timing macros
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# These default to enabled profiling without requiring AMSS_NCKU_Input.py edits.
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# Define fine-grained timing/debug macros.
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# All of them default to OFF so production builds do not pay profiling overhead.
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fine_timing = getattr(input_data, "Fine_Timing",
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getattr(input_data, "Finegrained_Timing", "yes"))
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getattr(input_data, "Finegrained_Timing", "no"))
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kernel_fine_timing = getattr(input_data, "Kernel_Fine_Timing",
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getattr(input_data, "BSSN_Kernel_Fine_Timing", "no"))
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stdin_abort_poll = getattr(input_data, "Enable_Stdin_Abort_Poll",
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getattr(input_data, "Stdin_Abort_Poll", "no"))
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timing_report_every = max(1, int(getattr(
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input_data, "Timing_Every_Steps",
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getattr(input_data, "Timing_Report_Every", 1))))
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@@ -172,6 +176,30 @@ def generate_macrodef_h():
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print( f"#define BSSN_FINE_TIMING_TOPN {timing_top_hotspots}", file=file1 )
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print( file=file1 )
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if ( kernel_fine_timing == "yes" ):
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print( "#define BSSN_KERNEL_FINE_TIMING 1", file=file1 )
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print( file=file1 )
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elif ( kernel_fine_timing == "no" ):
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print( "#define BSSN_KERNEL_FINE_TIMING 0", file=file1 )
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print( file=file1 )
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else:
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print( "Kernel_Fine_Timing setting error!!!" )
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print()
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print( "# Kernel_Fine_Timing setting error!!!", file=file1 )
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print( file=file1 )
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if ( stdin_abort_poll == "yes" ):
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print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 1", file=file1 )
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print( file=file1 )
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elif ( stdin_abort_poll == "no" ):
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print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 0", file=file1 )
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print( file=file1 )
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else:
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print( "Enable_Stdin_Abort_Poll setting error!!!" )
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print()
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print( "# Enable_Stdin_Abort_Poll setting error!!!", file=file1 )
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print( file=file1 )
|
||||
|
||||
# Define macro USE_GPU
|
||||
# use GPU or not
|
||||
|
||||
@@ -261,6 +289,12 @@ def generate_macrodef_h():
|
||||
print( "// define BSSN_FINE_TIMING_TOPN", file=file1 )
|
||||
print( "// number of hottest timing buckets shown in stdout", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_KERNEL_FINE_TIMING", file=file1 )
|
||||
print( "// enable split timing inside compute_rhs_bssn", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_ENABLE_STDIN_ABORT_POLL", file=file1 )
|
||||
print( "// poll stdin and broadcast abort flag every coarse step", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define USE_GPU", file=file1 )
|
||||
print( "// use gpu or not", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
|
||||
Reference in New Issue
Block a user